NOTE THAT FOR THE VERSION UPDATES THERE IS BACKWARD COMPATIBILITY (older arguments still works in the newer versions)

VERSION 0.9 

MassEM: Models without replacement (Mass encounter-mating models) -MRmax is left by default to mmax = min(n1,n2) where n1 = N/(1.0+osr), n2 = N-n1;

Female competition with parameter a=2 and choice with parameter c =3

Independent parameters (models 6, -6, -60)

-continuous 0 -numfiles 1000 -femtypes 2 -maletypes 2 -N 10000 -model -60 -matings 500 -uniform 0 -drift 0  -incrfactor 2 -choicefactor 3 

Composed parameters (models 8, -8, -80)

-continuous 0 -numfiles 1000 -femtypes 2 -maletypes 2 -N 10000 -model -80 -matings 500 -uniform 0 -drift 0  -incrfactor 2 -choicefactor 3 

Individual encounter and random mating: MassEM with -MRmax 1, the random mating under MassEM is set by the model number -123321

-continuous 0 -numfiles 1000 -femtypes 2 -maletypes 2 -N 2000 -model -123321 -matings 400 -uniform 0 -drift 0  -incrfactor 2 -choicefactor 3 -MRmax 1


VERSION 0.8

Model with replacement: Female competition with parameter a=2 and choice with parameter c =3

-continuous 0 -numfiles 10 -femtypes 2 -maletypes 2 -N 10000 -model 6 -matings 500 -uniform 0 -drift 1  -selfactor 2 -choicefactor 3



PREVIOUS VERSIONS 


10 tables with random mating (model =0) population size 10,000 sample size 500 phenotype population frequencies are uniform  but subjected to drift

-continuous 0 -numfiles 10 -N 10000 -model 0 -matings 500 -uniform 1 -drift 1


Individual-encounter mating with random mating. The MatSimUserModel.txt file must have propensities of 1 (should be in the same folder as the program)

-continuous 0 -numfiles 10 -N 10000 -model -5 -matings 500 -uniform 1 -drift 1


Model with replacement: Possitive assortative preferences with parameter 2

-continuous 0 -numfiles 10 -N 10000 -model 3 -matings 500 -uniform 1 -drift 1 -choicefactor 2

Individual-encounter mating with possitive assortative preferences with parameter 2

-continuous 0 -numfiles 10 -N 10000 -model -3 -matings 500 -uniform 1 -drift 1 -choicefactor 2


Negative assortative preferences with parameter 0.5

-continuous 0 -numfiles 10 -N 10000 -model 4 -matings 500 -uniform 1 -drift 1 -choicefactor 0.5


Massal-encounter mating with negative assortative preferences with parameter 0.5

-continuous 0 -numfiles 10 -N 10000 -model -40 -matings 500 -uniform 1 -drift 1 -choicefactor 0.5



Model with 3 female classes and 3 male classes. 
Individual-encounter mating with male sexual selection preferences with parameter 2 and user defined population frequencies (file MatSimUserFreqs.txt should be present in the same folder as the program)

-continuous 0 -numfiles 10 -femtypes 3 -maletypes 3 -N 10000 -model -2 -matings 500 -uniform 0 -drift 1 -posfactor 2 -userfreqs 1